Transcript: lnc-PPP1R27-2:3

Basic information

LNCipedia transcript ID: lnc-PPP1R27-2:3 
LNCipedia gene ID: lnc-PPP1R27-2
Location (hg38): chr17:81822417-81833291
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 601 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT056562
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1112.7027 non-coding 
CPAT coding probability 14.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R27-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM195B-2:2
4.0 lnc-FAM195B-2:2
4.1 lnc-FAM195B-2:2
5.0 lnc-FAM195B-2:2
5.1 lnc-PPP1R27-2:1
5.2 lnc-PPP1R27-2:3