Transcript: lnc-PPP1R3C-3:1

Basic information

LNCipedia transcript ID: lnc-PPP1R3C-3:1 
LNCipedia gene ID: lnc-PPP1R3C-3
Location (hg38): chr10:91296945-91565153
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 773 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001khj_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.6234 non-coding 
CPAT coding probability 2.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R3C-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP1R3C-3:1
4.0 lnc-PPP1R3C-3:1
4.1 lnc-PPP1R3C-3:1
5.0 lnc-PPP1R3C-3:1
5.1 lnc-HTR7-9:1
5.2 lnc-PPP1R3C-3:1