Transcript: lnc-PPP1R3G-9:8

Basic information

LNCipedia transcript ID: lnc-PPP1R3G-9:8 
LNCipedia gene ID: lnc-PPP1R3G-9
Location (hg38): chr6:5030001-5031013
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 404 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT107503
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.8803 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R3G-9:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP1R3G-2:7
4.0 LYRM4-AS1:11
4.1 LYRM4-AS1:11
5.0 LYRM4-AS1:11
5.1 lnc-PRPF4B-160:8
5.2 lnc-PPP1R3G-9:8