Transcript: lnc-PPP1R9B-5:3

Basic information

LNCipedia transcript ID: lnc-PPP1R9B-5:3 
LNCipedia gene ID: lnc-PPP1R9B-5
Location (hg38): chr17:50190909-50194058
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 600 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT054609
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.112 non-coding 
CPAT coding probability 96.01% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPP1R9B-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SAMD14-5:3
4.0 lnc-SAMD14-5:3
4.1 lnc-SAMD14-5:3
5.0 lnc-SAMD14-5:3
5.1 lnc-LRRC59-3:3
5.2 lnc-PPP1R9B-5:3