Transcript: lnc-PPP4C-10:2

Basic information

LNCipedia transcript ID: lnc-PPP4C-10:2 
LNCipedia gene ID: lnc-PPP4C-10
Location (hg38): chr16:30096424-30098825
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2402 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250616.2|ENCT00000158065.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.0451 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP4C-10:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPP4C-2:9
5.0 lnc-PPP4C-2:9
5.1 lnc-PRRT2-34:2
5.2 lnc-PPP4C-10:2