Transcript: lnc-PPP4R3C-2:4

Basic information

LNCipedia transcript ID: lnc-PPP4R3C-2:4 
LNCipedia gene ID: lnc-PPP4R3C-2
Location (hg38): chrX:27174920-27398990
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1872 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228933.3|ENST00000422048.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.0443 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP4R3C-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DCAF8L1-2:11
5.0 lnc-DCAF8L1-2:11
5.1 lnc-PCSK1N-120:4
5.2 lnc-PPP4R3C-2:4