Transcript: lnc-PPP4R3C-2:7

Basic information

LNCipedia transcript ID: lnc-PPP4R3C-2:7 
LNCipedia gene ID: lnc-PPP4R3C-2
Location (hg38): chrX:27349150-27398989
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1955 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT136547
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.0285 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP4R3C-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCAF8L1-2:4
4.0 lnc-DCAF8L1-2:4
4.1 lnc-DCAF8L1-2:4
5.0 lnc-DCAF8L1-2:4
5.1 lnc-PCSK1N-120:7
5.2 lnc-PPP4R3C-2:7