Transcript: lnc-PQLC1-104:7

Basic information

LNCipedia transcript ID: lnc-PQLC1-104:7 
LNCipedia gene ID: lnc-PQLC1-104
Ensembl Gene ID: ENSG00000274828
Ensembl Transcript ID: ENST00000616428
Location (hg38): chr18:79677287-79679358
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2072 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT060051; ENST00000616428.1
Alternative gene names: ENSG00000274828.1; RP11-567M16.6; AC068473.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 84.7278 coding 
CPAT coding probability 36.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PQLC1-104:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PQLC1-1:2
4.0 lnc-PQLC1-1:2
4.1 lnc-AC068473.1-1:8
5.0 lnc-AC068473.1-1:8
5.1 lnc-PQLC1-4:7
5.2 lnc-PQLC1-104:7