Transcript: lnc-PQLC1-105:1

Basic information

LNCipedia transcript ID: lnc-PQLC1-105:1 
LNCipedia gene ID: lnc-PQLC1-105
Ensembl Gene ID: ENSG00000265101
Ensembl Transcript ID: ENST00000580639
Location (hg38): chr18:78925064-78927441
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 523 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000580639.1; CTD-2382H12.1-001; OTTHUMT00000446091.1; NONHSAT060016
Alternative gene names: ENSG00000265101.1; CTD-2382H12.1; OTTHUMG00000179400.1; AC091027.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.7955 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PQLC1-105:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC068473.1-3:1
4.0 lnc-AC068473.1-3:1
4.1 lnc-AC068473.1-3:1
5.0 lnc-AC068473.1-3:1
5.1 lnc-PQLC1-5:1
5.2 lnc-PQLC1-105:1