Transcript: lnc-PQLC1-7:2

Basic information

LNCipedia transcript ID: lnc-PQLC1-7:2 
LNCipedia gene ID: lnc-PQLC1-7
Ensembl Gene ID: ENSG00000266901
Ensembl Transcript ID: ENST00000587315
Location (hg38): chr18:79702721-79703651
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 474 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT060055; ENST00000587315.1
Alternative gene names: ENSG00000266901.1; RP11-567M16.5; AC068473.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.6288 non-coding 
CPAT coding probability 2.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PQLC1-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC068473.1-7:1
4.0 lnc-AC068473.1-7:1
4.1 lnc-AC068473.1-7:1
5.0 lnc-AC068473.1-7:1
5.1 lnc-PQLC1-7:1
5.2 lnc-PQLC1-7:2