Transcript: lnc-PRAC2-13:1

Basic information

LNCipedia transcript ID: lnc-PRAC2-13:1 
LNCipedia gene ID: lnc-PRAC2-13
Location (hg38): chr17:48585514-48586082
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 569 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT054427
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -168.5324 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRAC2-13:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CALCOCO2-13:1
4.0 lnc-CALCOCO2-13:1
4.1 lnc-CALCOCO2-13:1
5.0 lnc-CALCOCO2-13:1
5.1 lnc-ACSF2-58:1
5.2 lnc-PRAC2-13:1