Transcript: lnc-PRAF2-4:1

Basic information

LNCipedia transcript ID: lnc-PRAF2-4:1 
LNCipedia gene ID: lnc-PRAF2-4
Location (hg38): chrX:49080101-49101144
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 791 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT136992
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -250.015 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRAF2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AF196779.12.1-1:1
4.0 lnc-AF196779.12.1-1:1
4.1 lnc-AF196779.12.1-1:1
5.0 lnc-AF196779.12.1-1:1
5.1 lnc-FOXP3-5:1
5.2 lnc-PRAF2-4:1