Transcript: lnc-PRDM10-2:1

Basic information

LNCipedia transcript ID: lnc-PRDM10-2:1 
LNCipedia gene ID: lnc-PRDM10-2
Location (hg38): chr11:130082495-130082781
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 287 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT025116
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.0926 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRDM10-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRDM10-2:1
4.0 lnc-PRDM10-2:1
4.1 lnc-PRDM10-2:1
5.0 lnc-PRDM10-2:1
5.1 lnc-ADAMTS8-5:1
5.2 lnc-PRDM10-2:1