Transcript: lnc-PRDM11-3:8

Basic information

LNCipedia transcript ID: lnc-PRDM11-3:8 
LNCipedia gene ID: lnc-PRDM11-3
RefSeq ID: NR_120558
Location (hg38): chr11:45355371-45356657
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 494 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120558; NR_120558.1
Alternative gene names: LOC101928812


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -155.3512 non-coding 
CPAT coding probability 4.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRDM11-3:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRDM11-3:8
4.0 lnc-PRDM11-3:8
4.1 lnc-PRDM11-3:8
5.0 lnc-PRDM11-3:8
5.1 lnc-OR5L2-91:4
5.2 lnc-PRDM11-3:8