Transcript: lnc-PRDM11-4:2

Basic information

LNCipedia transcript ID: lnc-PRDM11-4:2 
LNCipedia gene ID: lnc-PRDM11-4
Location (hg38): chr11:45371413-45372125
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 713 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT019025; ENST00000596169.1
Alternative gene names: ENSG00000255267.2; RP11-430H10.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -303.9216 non-coding 
CPAT coding probability 50.35% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PRDM11-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRDM11-4:2
4.0 lnc-PRDM11-4:2
4.1 lnc-PRDM11-4:2
5.0 lnc-PRDM11-4:2
5.1 lnc-OR5L2-90:2
5.2 lnc-PRDM11-4:2