Transcript: lnc-PRDM4-6:2

Basic information

LNCipedia transcript ID: lnc-PRDM4-6:2 
LNCipedia gene ID: lnc-PRDM4-6
Location (hg38): chr12:107903150-107903771
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 622 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT030525; NR_037629
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.1185 non-coding 
CPAT coding probability 6.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRDM4-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRDM4-6:2
4.0 lnc-PRDM4-6:2
4.1 lnc-PRDM4-6:2
5.0 lnc-PRDM4-6:2
5.1 lnc-GPN3-47:3
5.2 lnc-PRDM4-6:2