Transcript: lnc-PRELID3B-3:1

Basic information

LNCipedia transcript ID: lnc-PRELID3B-3:1 
LNCipedia gene ID: lnc-PRELID3B-3
RefSeq ID: NR_037929
Location (hg38): chr20:59028678-59042846
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1027 bp
Exons: 8
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT080611; NR_037929; NR_037929.1
Alternative gene names: SLMO2-ATP5E


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 3 non-coding 
PhyloCSF score 3443.5707 coding 
CPAT coding probability 92.85% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PRELID3B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLMO2-3:2
4.0 lnc-SLMO2-3:2
4.1 lnc-SLMO2-3:2
5.0 lnc-SLMO2-3:2
5.1 lnc-SPATA2-119:1
5.2 lnc-PRELID3B-3:1