Transcript: lnc-PREX1-10:2

Basic information

LNCipedia transcript ID: lnc-PREX1-10:2 
LNCipedia gene ID: lnc-PREX1-10
Location (hg38): chr20:48919212-48921617
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2221 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000055036.1|MICT00000219429.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.7928 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PREX1-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PREX1-10:2
5.0 lnc-PREX1-10:2
5.1 lnc-SPATA2-29:2
5.2 lnc-PREX1-10:2