Transcript: lnc-PRIM2-7:13

Basic information

LNCipedia transcript ID: lnc-PRIM2-7:13 
LNCipedia gene ID: lnc-PRIM2-7
Location (hg38): chr6:58162610-58187582
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 497 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000457561.2
Alternative gene names: ENSG00000223633.2; RP11-143A22.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.6673 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRIM2-7:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BAG2-7:2
4.0 lnc-BAG2-7:2
4.1 lnc-BAG2-7:2
5.0 lnc-BAG2-7:2
5.1 lnc-HCRTR2-21:13
5.2 lnc-PRIM2-7:13