Transcript: lnc-PRIM2-7:4

Basic information

LNCipedia transcript ID: lnc-PRIM2-7:4 
LNCipedia gene ID: lnc-PRIM2-7
Location (hg38): chr6:57961548-58178797
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1039 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000084208.1|FTMT22300052304.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -272.8439 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRIM2-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BAG2-7:6
5.0 lnc-BAG2-7:6
5.1 lnc-HCRTR2-21:4
5.2 lnc-PRIM2-7:4