Transcript: lnc-PRIMPOL-2:2

Basic information

LNCipedia transcript ID: lnc-PRIMPOL-2:2 
LNCipedia gene ID: lnc-PRIMPOL-2
Location (hg38): chr4:184506128-184515654
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9047 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000512812; TCONS_00007688; NONHSAT099547
Alternative gene names: ENSG00000249161; XLOC_003808; linc-CCDC111-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.5452 non-coding 
CPAT coding probability 12.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRIMPOL-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCDC111-1:1
3.1 lnc-CCDC111-1:1
4.0 lnc-CCDC111-1:1
4.1 lnc-CCDC111-1:1
5.0 lnc-CCDC111-1:1
5.1 lnc-FAM149A-30:2
5.2 lnc-PRIMPOL-2:2