Transcript: lnc-PRKAB2-2:5

Basic information

LNCipedia transcript ID: lnc-PRKAB2-2:5 
LNCipedia gene ID: lnc-PRKAB2-2
Ensembl Gene ID: ENSG00000234225
Ensembl Transcript ID: ENST00000425109
Location (hg38): chr1:147001931-147003618
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 735 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425109.2
Alternative gene names: ENSG00000234225.2; RP4-704D21.2; AC244394.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.7852 non-coding 
CPAT coding probability 3.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKAB2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PPIAL4G-53:1
5.1 lnc-PPIAL4G-53:1
5.2 lnc-PRKAB2-2:5