Transcript: lnc-PRKN-14:2

Basic information

LNCipedia transcript ID: lnc-PRKN-14:2 
LNCipedia gene ID: lnc-PRKN-14
Location (hg38): chr6:162957258-162957548
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 291 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT115947
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.0544 non-coding 
CPAT coding probability 6.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKN-14:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL078585.1-14:1
4.0 lnc-AL078585.1-14:1
4.1 lnc-AL078585.1-14:1
5.0 lnc-AL078585.1-14:1
5.1 lnc-PRKN-14:1
5.2 lnc-PRKN-14:2