Transcript: lnc-PRKN-21:11

Basic information

LNCipedia transcript ID: lnc-PRKN-21:11 
LNCipedia gene ID: lnc-PRKN-21
Location (hg38): chr6:163343555-163346573
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 489 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00012352
Alternative gene names: XLOC_005909; linc-PARK2-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.2289 non-coding 
CPAT coding probability 8.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKN-21:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL078585.1-1:2
3.1 lnc-AL078585.1-2:2
4.0 lnc-AL078585.1-21:2
4.1 lnc-AL078585.1-21:2
5.0 lnc-AL078585.1-21:2
5.1 lnc-PRKN-21:5
5.2 lnc-PRKN-21:11