Transcript: lnc-PRKN-21:12

Basic information

LNCipedia transcript ID: lnc-PRKN-21:12 
LNCipedia gene ID: lnc-PRKN-21
Location (hg38): chr6:163338699-163341030
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1447 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012823; NONHSAT115958
Alternative gene names: XLOC_005909; linc-PARK2-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.2988 non-coding 
CPAT coding probability 24.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKN-21:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL078585.1-1:3
3.1 lnc-AL078585.1-2:3
4.0 lnc-AL078585.1-21:3
4.1 lnc-AL078585.1-21:3
5.0 lnc-AL078585.1-21:3
5.1 lnc-PRKN-21:6
5.2 lnc-PRKN-21:12