Transcript: lnc-PRKN-22:3

Basic information

LNCipedia transcript ID: lnc-PRKN-22:3 
LNCipedia gene ID: lnc-PRKN-22
Location (hg38): chr6:163403937-163405072
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1136 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270419.1|FTMT22200011499.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -125.3204 non-coding 
CPAT coding probability 3.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKN-22:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL078585.1-22:1
5.0 lnc-AL078585.1-22:1
5.1 lnc-PRKN-22:1
5.2 lnc-PRKN-22:3