Transcript: lnc-PRKN-4:2

Basic information

LNCipedia transcript ID: lnc-PRKN-4:2 
LNCipedia gene ID: lnc-PRKN-4
Location (hg38): chr6:163507233-163511346
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3571 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000513446
Alternative gene names: ENSG00000251068


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.0507 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKN-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL078585.1-3:1
3.1 lnc-AL078585.1-4:1
4.0 lnc-AL078585.1-4:1
4.1 lnc-AL078585.1-4:1
5.0 lnc-AL078585.1-4:1
5.1 lnc-PRKN-4:1
5.2 lnc-PRKN-4:2