Transcript: lnc-PRKX-5:1

Basic information

LNCipedia transcript ID: lnc-PRKX-5:1 
LNCipedia gene ID: lnc-PRKX-5
Location (hg38): chrX:4771083-4774195
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1916 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017284; NONHSAT136149
Alternative gene names: XLOC_008106; linc-PRKX-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.4778 non-coding 
CPAT coding probability 12.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKX-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-706O15.1.1-5:1
3.1 lnc-RP11-706O15.1.1-5:1
4.0 lnc-RP11-706O15.1.1-5:1
4.1 lnc-RP11-706O15.1.1-5:1
5.0 lnc-RP11-706O15.1.1-5:1
5.1 lnc-PCSK1N-245:1
5.2 lnc-PRKX-5:1