Transcript: lnc-PRM1-1:5

Basic information

LNCipedia transcript ID: lnc-PRM1-1:5 
LNCipedia gene ID: lnc-PRM1-1
Location (hg38): chr16:11336371-11345288
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8576 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000263080.1|MICT00000127329.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 39.4344 non-coding 
CPAT coding probability 5.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRM1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PRM1-1:5
5.0 lnc-PRM1-1:5
5.1 lnc-PARN-59:4
5.2 lnc-PRM1-1:5