Transcript: lnc-PRMT8-6:2

Basic information

LNCipedia transcript ID: lnc-PRMT8-6:2 
LNCipedia gene ID: lnc-PRMT8-6
Location (hg38): chr12:3788913-3790317
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1405 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT025927; FPKM1_group_5646_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.3162 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRMT8-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRMT8-6:2
4.0 lnc-PRMT8-6:2
4.1 lnc-PRMT8-6:2
5.0 lnc-PRMT8-6:2
5.1 lnc-CLEC4D-113:2
5.2 lnc-PRMT8-6:2