Transcript: lnc-PRND-4:1

Basic information

LNCipedia transcript ID: lnc-PRND-4:1 
LNCipedia gene ID: lnc-PRND-4
Ensembl Gene ID: ENSG00000278595
Ensembl Transcript ID: ENST00000617466
Location (hg38): chr20:4761300-4761696
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 397 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000617466.1
Alternative gene names: ENSG00000278595.1; RP5-1068H6.6; AL133396.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.2074 non-coding 
CPAT coding probability 7.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRND-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PRND-4:1
4.1 lnc-PRND-4:1
5.0 lnc-PRND-4:1
5.1 lnc-PANK2-6:1
5.2 lnc-PRND-4:1