Transcript: lnc-PROC-1:3

Basic information

LNCipedia transcript ID: lnc-PROC-1:3 
LNCipedia gene ID: lnc-PROC-1
Location (hg38): chr2:127388211-127405848
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 328 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT074149
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.5455 non-coding 
CPAT coding probability 3.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PROC-1:3 no no no no

Available literature

  1. Huang (2016), Aberrant expression of long noncoding RNAs in cumulus cells isolated from PCOS patients., J. Assist. Reprod. Genet.
  2. Zhu (2014), The long noncoding RNA expression profile of hepatocellular carcinoma identified by microarray analysis., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PROC-1:3
4.0 lnc-PROC-1:3
4.1 lnc-PROC-1:3
5.0 lnc-PROC-1:3
5.1 lnc-MYO7B-4:10
5.2 lnc-PROC-1:3