Transcript: lnc-PRODH2-5:1

Basic information

LNCipedia transcript ID: lnc-PRODH2-5:1 
LNCipedia gene ID: lnc-PRODH2-5
RefSeq ID: NR_104176
Location (hg38): chr19:35788876-35797909
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2191 bp
Exons: 8
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104176; NR_104176.1
Alternative gene names: ; LINC01529


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.8041 non-coding 
CPAT coding probability 9.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRODH2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRODH2-1:4
4.0 LINC01529:1
4.1 LINC01529:1
5.0 LINC01529:1
5.1 lnc-SCGB2B2-57:1
5.2 lnc-PRODH2-5:1