Transcript: lnc-PROK1-2:1

Basic information

LNCipedia transcript ID: lnc-PROK1-2:1 
LNCipedia gene ID: lnc-PROK1-2
Ensembl Gene ID: ENSG00000283999
Ensembl Transcript ID: ENST00000640695
Location (hg38): chr1:110473756-110488663
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1186 bp
Exons: 8
Sources: NONCODE v4; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT005135; ENST00000640695.1
Alternative gene names: ENSG00000283999.1; AL358215.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.3841 non-coding 
CPAT coding probability 11.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PROK1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PROK1-2:1
4.0 lnc-PROK1-2:1
4.1 lnc-PROK1-2:1
5.0 lnc-PROK1-2:1
5.1 lnc-KCNC4-9:2
5.2 lnc-PROK1-2:1