Transcript: lnc-PROK1-2:6

Basic information

LNCipedia transcript ID: lnc-PROK1-2:6 
LNCipedia gene ID: lnc-PROK1-2
Ensembl Gene ID: ENSG00000282887
Ensembl Transcript ID: ENST00000634812
Location (hg38): chr1:110473776-110474980
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 431 bp
Exons: 3
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634812.2
Alternative gene names: ENSG00000282887.2; AL358215.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.7508 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PROK1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-KCNC4-9:4
5.1 lnc-KCNC4-9:4
5.2 lnc-PROK1-2:6