Transcript: lnc-PROX1-41:2

Basic information

LNCipedia transcript ID: lnc-PROX1-41:2 
LNCipedia gene ID: lnc-PROX1-41
RefSeq ID: NR_046189
Location (hg38): chr1:213924749-213926654
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1906 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046189.1
Alternative gene names: LINC00538


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.2728 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PROX1-41:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DTL-41:2
5.1 lnc-DTL-41:2
5.2 lnc-PROX1-41:2