Transcript: lnc-PRPF18-1:11

Basic information

LNCipedia transcript ID: lnc-PRPF18-1:11 
LNCipedia gene ID: lnc-PRPF18-1
Ensembl Gene ID: ENSG00000239665
Ensembl Transcript ID: ENST00000599378
Location (hg38): chr10:13636997-13644980
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 509 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT011511; ENST00000599378.5
Alternative gene names: ENSG00000239665.8; RP11-295P9.3; AL157392.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.5286 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRPF18-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRPF18-1:11
4.0 lnc-PRPF18-1:11
4.1 lnc-PRPF18-1:11
5.0 lnc-PRPF18-1:11
5.1 lnc-NPY4R2-365:12
5.2 lnc-PRPF18-1:11