Transcript: lnc-PRPF18-7:4

Basic information

LNCipedia transcript ID: lnc-PRPF18-7:4 
LNCipedia gene ID: lnc-PRPF18-7
Location (hg38): chr10:14011421-14018166
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2384 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000106329.1|MICT00000037480.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -94.7997 non-coding 
CPAT coding probability 3.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRPF18-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PRPF18-7:4
5.0 lnc-PRPF18-7:4
5.1 lnc-NPY4R2-358:4
5.2 lnc-PRPF18-7:4