Transcript: lnc-PRPF4B-4:9

Basic information

LNCipedia transcript ID: lnc-PRPF4B-4:9 
LNCipedia gene ID: lnc-PRPF4B-4
Location (hg38): chr6:4098633-4101047
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1360 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT107312
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.1266 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRPF4B-4:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf201-4:13
4.0 lnc-PRPF4B-4:9
4.1 lnc-PRPF4B-4:9
5.0 lnc-PRPF4B-4:9
5.1 lnc-PRPF4B-7:10
5.2 lnc-PRPF4B-4:9