Transcript: lnc-PRR4-1:10

Basic information

LNCipedia transcript ID: lnc-PRR4-1:10 
LNCipedia gene ID: lnc-PRR4-1
Location (hg38): chr12:10895168-10896952
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 297 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000544947.1; RP11-144O23.18-001; OTTHUMT00000402116.1; NONHSAT026911
Alternative gene names: ENSG00000256419.1; RP11-144O23.18; OTTHUMG00000169062.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.1559 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRR4-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRH1-1:1
4.0 lnc-PRR4-1:10
4.1 lnc-PRR4-1:10
5.0 lnc-PRR4-1:10
5.1 lnc-M6PR-48:12
5.2 lnc-PRR4-1:10