Transcript: lnc-PRSS22-1:1

Basic information

LNCipedia transcript ID: lnc-PRSS22-1:1 
LNCipedia gene ID: lnc-PRSS22-1
Location (hg38): chr16:2866429-2868211
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 617 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024546; NONHSAT147885
Alternative gene names: XLOC_011856; linc-PRSS22


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.9176 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS22-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRSS22-1:1
3.1 lnc-PRSS22-1:1
4.0 lnc-PRSS22-1:1
4.1 lnc-PRSS22-1:1
5.0 lnc-PRSS22-1:1
5.1 lnc-PKMYT1-14:1
5.2 lnc-PRSS22-1:1