Transcript: lnc-PRSS27-2:17

Basic information

LNCipedia transcript ID: lnc-PRSS27-2:17 
LNCipedia gene ID: lnc-PRSS27-2
Location (hg38): chr16:2677077-2684798
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1371 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002crh_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.8307 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS27-2:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRSS27-3:1
4.0 lnc-PRSS27-3:1
4.1 lnc-PRSS27-2:17
5.0 lnc-PRSS27-2:17
5.1 lnc-PKMYT1-28:1
5.2 lnc-PRSS27-2:17