Transcript: lnc-PRSS27-4:5

Basic information

LNCipedia transcript ID: lnc-PRSS27-4:5 
LNCipedia gene ID: lnc-PRSS27-4
Ensembl Gene ID: ENSG00000260565
Ensembl Transcript ID: ENST00000564160
Location (hg38): chr16:2672326-2673444
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 983 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564160.1; ERVK13-1-005; OTTHUMT00000436121.1; NONHSAT147825
Alternative gene names: ENSG00000260565.1; ERVK13-1; OTTHUMG00000176054.2; ENSG00000260565.2; ENSG00000260565.6; CTD-2270P14.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.8227 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS27-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRSS27-2:1
4.0 lnc-PRSS27-2:1
4.1 lnc-PRSS27-2:1
5.0 lnc-PRSS27-2:1
5.1 lnc-PKMYT1-32:5
5.2 lnc-PRSS27-4:5