Transcript: lnc-PRSS27-4:7

Basic information

LNCipedia transcript ID: lnc-PRSS27-4:7 
LNCipedia gene ID: lnc-PRSS27-4
RefSeq ID: NR_040023
Location (hg38): chr16:2658389-2673439
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8336 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT147816; NR_040023; NR_040023.1
Alternative gene names: ERVK13-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 55.497 non-coding 
CPAT coding probability 99.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PRSS27-4:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRSS27-2:11
4.0 lnc-PRSS27-2:11
4.1 lnc-PRSS27-2:11
5.0 lnc-PRSS27-2:11
5.1 lnc-PKMYT1-32:7
5.2 lnc-PRSS27-4:7