Transcript: lnc-PRSS3-1:1

Basic information

LNCipedia transcript ID: lnc-PRSS3-1:1 
LNCipedia gene ID: lnc-PRSS3-1
Location (hg38): chr9:33730111-33742434
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 981 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015948; NONHSAT130792
Alternative gene names: XLOC_007326; linc-PRSS3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.5373 non-coding 
CPAT coding probability 5.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRSS3-1:1
3.1 lnc-PRSS3-1:1
4.0 lnc-PRSS3-1:1
4.1 lnc-PRSS3-1:1
5.0 lnc-PRSS3-1:1
5.1 lnc-RECK-54:1
5.2 lnc-PRSS3-1:1