Transcript: lnc-PRSS3-1:4

Basic information

LNCipedia transcript ID: lnc-PRSS3-1:4 
LNCipedia gene ID: lnc-PRSS3-1
Location (hg38): chr9:33731119-33733331
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 517 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016566; NONHSAT130797
Alternative gene names: XLOC_007326; linc-PRSS3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.7424 non-coding 
CPAT coding probability 5.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS3-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRSS3-1:4
3.1 lnc-PRSS3-1:4
4.0 lnc-PRSS3-1:4
4.1 lnc-PRSS3-1:4
5.0 lnc-PRSS3-1:4
5.1 lnc-RECK-54:6
5.2 lnc-PRSS3-1:4