Transcript: lnc-PRSS3-2:12

Basic information

LNCipedia transcript ID: lnc-PRSS3-2:12 
LNCipedia gene ID: lnc-PRSS3-2
Location (hg38): chr9:33697459-33701126
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3668 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT130782; FPKM1_group_32988_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.5532 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS3-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRBV25OR9-2-1:2
4.0 lnc-TRBV25OR9-2-1:2
4.1 lnc-TRBV25OR9-2-2:11
5.0 lnc-TRBV25OR9-2-2:11
5.1 lnc-RECK-55:11
5.2 lnc-PRSS3-2:12