Transcript: lnc-PRSS3-2:13

Basic information

LNCipedia transcript ID: lnc-PRSS3-2:13 
LNCipedia gene ID: lnc-PRSS3-2
Location (hg38): chr9:33705039-33708781
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3115 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT130785; FPKM1_group_32989_transcript_6
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.6923 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS3-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRSS3-3:2
4.0 lnc-PRSS3-3:2
4.1 lnc-TRBV25OR9-2-2:12
5.0 lnc-TRBV25OR9-2-2:12
5.1 lnc-RECK-55:12
5.2 lnc-PRSS3-2:13