Transcript: lnc-PRSS3-2:14

Basic information

LNCipedia transcript ID: lnc-PRSS3-2:14 
LNCipedia gene ID: lnc-PRSS3-2
Location (hg38): chr9:33705089-33708781
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1698 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015947; NONHSAT130786
Alternative gene names: XLOC_007324; linc-PRSS3-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.6923 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS3-2:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRSS3-3:1
3.1 lnc-PRSS3-3:1
4.0 lnc-PRSS3-3:1
4.1 lnc-TRBV25OR9-2-2:13
5.0 lnc-TRBV25OR9-2-2:13
5.1 lnc-RECK-55:13
5.2 lnc-PRSS3-2:14