Transcript: lnc-PRSS3-2:7

Basic information

LNCipedia transcript ID: lnc-PRSS3-2:7 
LNCipedia gene ID: lnc-PRSS3-2
Location (hg38): chr9:33677396-33710850
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 15576 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000105259.1|ENCT00000445239.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 39.6955 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS3-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TRBV25OR9-2-2:6
5.0 lnc-TRBV25OR9-2-2:6
5.1 lnc-RECK-55:6
5.2 lnc-PRSS3-2:7